AlphaFold 2.3 on RTX A6000 kernel panic with 535.129.03 driver

While running the latest AlphaFold 2.3 on RTX A6000 with 535.129.03 driver, the kernel panics with the attached message.

Kernel: Linux 5.15.0-88-generic #98-Ubuntu SMP Mon Oct 2 15:18:56 UTC 2023 x86_64 GNU/Linux
CPU: Intel(R) Xeon(R) Silver 4316, two socket
GPU: RTX A6000, five cards

dmesg.txt (104.0 KB)
nvidia-bug-report.log.gz (2.0 MB)

Solved by turning off “Intel VT-d for directed I/O → ACS control” option in bios.

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