Hi,
I am trying to convert a DICOM RT Structure file to nii,gz format for training. I am using the following command. I have appended -l as documented in Clara documentation.
nvmidl-dataconvert -d /workspace/clara-experiments/testdata/pros_rs_001 -r 1 -s .dcm -e .nii.gz -o /workspace/clara-experiments/testdata/convert -l
However I encountered the below error during the conversion.
root@1b9994571a00:/workspace/clara-experiments/testdata# nvmidl-dataconvert -d /workspace/clara-experiments/testdata/pros_rs_001 -r 1 -s .dcm -e .nii.gz -o /workspace/clara-experiments/testdata/convert -l
Converting dicom series 1 of 1 in .
WARNING: In /tmp/SimpleITK-build/ITK/Modules/IO/GDCM/src/itkGDCMSeriesFileNames.cxx, line 122
GDCMSeriesFileNames (0x1df1900): No Series can be found, make sure your restrictions are not too strong
Failed to convert image file: /workspace/clara-experiments/testdata/pros_rs_001. Skipped!
Am I using the correct command?