Hi ! I got this error while entering the fourth command
ih5py/_conv.pyx:858:57: Cannot convert '<error>' to Python object
Error compiling Cython file:
------------------------------------------------------------
...
H5Tunregister(H5T_PERS_SOFT, "fixed2vlen", -1, -1, fixed2vlen)
H5Tunregister(H5T_PERS_HARD, "objref2pyref", -1, -1, objref2pyref)
H5Tunregister(H5T_PERS_HARD, "pyref2objref", -1, -1, pyref2objref)
H5Tunregister(H5T_PERS_HARD, "regref2pyref", -1, -1, regref2pyref)
^
------------------------------------------------------------
h5py/_conv.pyx:860:57: Cannot convert '<error>' to Python object
Error compiling Cython file:
------------------------------------------------------------
...
H5Tunregister(H5T_PERS_HARD, "objref2pyref", -1, -1, objref2pyref)
H5Tunregister(H5T_PERS_HARD, "pyref2objref", -1, -1, pyref2objref)
H5Tunregister(H5T_PERS_HARD, "regref2pyref", -1, -1, regref2pyref)
H5Tunregister(H5T_PERS_HARD, "pyref2regref", -1, -1, pyref2regref)
^
------------------------------------------------------------
h5py/_conv.pyx:861:57: Cannot convert '<error>' to Python object
Error compiling Cython file:
------------------------------------------------------------
...
H5Tunregister(H5T_PERS_HARD, "pyref2objref", -1, -1, pyref2objref)
H5Tunregister(H5T_PERS_HARD, "regref2pyref", -1, -1, regref2pyref)
H5Tunregister(H5T_PERS_HARD, "pyref2regref", -1, -1, pyref2regref)
H5Tunregister(H5T_PERS_SOFT, "enum2int", -1, -1, enum2int)
^
------------------------------------------------------------
h5py/_conv.pyx:863:53: Cannot convert '<error>' to Python object
Error compiling Cython file:
------------------------------------------------------------
...
H5Tunregister(H5T_PERS_HARD, "regref2pyref", -1, -1, regref2pyref)
H5Tunregister(H5T_PERS_HARD, "pyref2regref", -1, -1, pyref2regref)
H5Tunregister(H5T_PERS_SOFT, "enum2int", -1, -1, enum2int)
H5Tunregister(H5T_PERS_SOFT, "int2enum", -1, -1, int2enum)
^
------------------------------------------------------------
h5py/_conv.pyx:864:53: Cannot convert '<error>' to Python object
Error compiling Cython file:
------------------------------------------------------------
...
H5Tunregister(H5T_PERS_HARD, "pyref2regref", -1, -1, pyref2regref)
H5Tunregister(H5T_PERS_SOFT, "enum2int", -1, -1, enum2int)
H5Tunregister(H5T_PERS_SOFT, "int2enum", -1, -1, int2enum)
H5Tunregister(H5T_PERS_SOFT, "vlen2ndarray", -1, -1, vlen2ndarray)
^
------------------------------------------------------------
h5py/_conv.pyx:866:57: Cannot convert '<error>' to Python object
Error compiling Cython file:
------------------------------------------------------------
...
H5Tunregister(H5T_PERS_SOFT, "enum2int", -1, -1, enum2int)
H5Tunregister(H5T_PERS_SOFT, "int2enum", -1, -1, int2enum)
H5Tunregister(H5T_PERS_SOFT, "vlen2ndarray", -1, -1, vlen2ndarray)
H5Tunregister(H5T_PERS_SOFT, "ndarray2vlen", -1, -1, ndarray2vlen)
^
------------------------------------------------------------
h5py/_conv.pyx:867:57: Cannot convert '<error>' to Python object
Traceback (most recent call last):
File "<string>", line 1, in <module>
File "/tmp/pip-install-qh3zoi2a/h5py/setup.py", line 168, in <module>
cmdclass = CMDCLASS,
File "/usr/local/lib/python3.6/dist-packages/setuptools/__init__.py", line 165, in setup
return distutils.core.setup(**attrs)
File "/usr/lib/python3.6/distutils/core.py", line 148, in setup
dist.run_commands()
File "/usr/lib/python3.6/distutils/dist.py", line 955, in run_commands
self.run_command(cmd)
File "/usr/lib/python3.6/distutils/dist.py", line 974, in run_command
cmd_obj.run()
File "/usr/local/lib/python3.6/dist-packages/setuptools/command/install.py", line 61, in run
return orig.install.run(self)
File "/usr/lib/python3.6/distutils/command/install.py", line 589, in run
self.run_command('build')
File "/usr/lib/python3.6/distutils/cmd.py", line 313, in run_command
self.distribution.run_command(command)
File "/usr/lib/python3.6/distutils/dist.py", line 974, in run_command
cmd_obj.run()
File "/usr/lib/python3.6/distutils/command/build.py", line 135, in run
self.run_command(cmd_name)
File "/usr/lib/python3.6/distutils/cmd.py", line 313, in run_command
self.distribution.run_command(command)
File "/usr/lib/python3.6/distutils/dist.py", line 974, in run_command
cmd_obj.run()
File "/tmp/pip-install-qh3zoi2a/h5py/setup_build.py", line 203, in run
force=config.rebuild_required or self.force)
File "/tmp/pip-install-qh3zoi2a/h5py/.eggs/Cython-3.0a6-py3.6.egg/Cython/Build/Dependencies.py", line 1110, in cythonize
cythonize_one(*args)
File "/tmp/pip-install-qh3zoi2a/h5py/.eggs/Cython-3.0a6-py3.6.egg/Cython/Build/Dependencies.py", line 1277, in cythonize_one
raise CompileError(None, pyx_file)
Cython.Compiler.Errors.CompileError: /tmp/pip-install-qh3zoi2a/h5py/h5py/_conv.pyx
----------------------------------------
ERROR: Command errored out with exit status 1: /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-install-qh3zoi2a/h5py/setup.py'"'"'; __file__='"'"'/tmp/pip-install-qh3zoi2a/h5py/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' install --record /tmp/pip-record-5a4hkp9l/install-record.txt --single-version-externally-managed --compile --install-headers /usr/local/include/python3.6/h5py Check the logs for full command output.
WARNING: You are using pip version 20.2; however, version 20.2.1 is available.
Any idea what’s going on and how can I solve it ?