Description
Hi! I would like to get some help while building the docker file in AlphaFold2.
when I execute the command following
sudo docker build -f docker/Dockerfile -t alphafold .
I got the following error.
Get:22 http://archive.ubuntu.com/ubuntu focal-backports/main amd64 Packages [2668 B]
Fetched 19.7 MB in 6s (3575 kB/s)
Reading package lists...
Reading package lists...
Building dependency tree...
Reading state information...
E: Unable to locate package cuda-command-line-tools
The following is my docker file (slightly changed from the original alphafold2 docker file).
ARG CUDA=11.4.2
ARG CUDA2=11.4
FROM nvidia/cuda:${CUDA}-cudnn8-runtime-ubuntu20.04
# FROM directive resets ARGS, so we specify again (the value is retained if
# previously set).
ARG CUDA
# Use bash to support string substitution.
SHELL ["/bin/bash", "-c"]
RUN apt-get update && DEBIAN_FRONTEND=noninteractive apt-get install -y \
build-essential \
cmake \
cuda-command-line-tools-${CUDA2/./-} \
git \
hmmer \
kalign \
tzdata \
wget \
&& rm -rf /var/lib/apt/lists/*
Environment
TensorRT Version:
GPU Type: NVIDIA GeForce RTX 3090
Nvidia Driver Version: 470.57.02
CUDA Version: 11.4
CUDNN Version: 8.2.0
Operating System + Version:Ubuntu20.04
Relevant Files
Steps To Reproduce
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