2021-11-26 04:39:31,735 [MainThread  ] [INFO ]  [DicomIO.Writer] execute() is called.
2021-11-26 04:39:31,735 [MainThread  ] [INFO ]  Converting image files in /input to DICOM series in /output using original DICOM files in /dicom
2021-11-26 04:39:31,735 [MainThread  ] [INFO ]  Searching for series in directory '/dicom'
2021-11-26 04:39:31,882 [MainThread  ] [INFO ]  Found {'1.3.12.2.1107.5.4.4.1486.30000016062023324415600000018'} series ids in "/dicom"
2021-11-26 04:39:31,968 [MainThread  ] [INFO ]  Searching for *.mhd in '/input'
2021-11-26 04:39:31,969 [MainThread  ] [INFO ]  Found the following mhd file '/input/1.3.12.2.1107.5.4.4.1486.30000016062023324415600000018.mhd'
2021-11-26 04:39:31,969 [MainThread  ] [INFO ]  Creating a series of dicom files in '/output' from '/input/1.3.12.2.1107.5.4.4.1486.30000016062023324415600000018.mhd'
2021-11-26 04:39:32,354 [MainThread  ] [INFO ]  Creating Dicom metadata for '/input/1.3.12.2.1107.5.4.4.1486.30000016062023324415600000018.mhd'
2021-11-26 04:39:33,079 [MainThread  ] [ERROR]  Exception caught and re-thrown: tuple index out of range
{"event": {"category": "operator", "name":"processing_started", "level": "info", "timestamp": "20211126T043854.385Z"}, "message": "Dicom Writer"}
[PERF] Dicom Writer Start Time: 1637901534385
Traceback (most recent call last):
{"event": {"category": "operator", "name":"processing_started", "level": "info", "timestamp": "20211126T043931.735Z", "stage": "mhd to dicom"}, "message": "MHD to Dicom"}
  File "/usr/local/lib/python3.6/dist-packages/nvidia_clara_pipeline_driver/driver.py", line 209, in nvidia_clara_python_cpd_execute_callback
[PERF] MHD to Dicom Start Time: 1637901571735
    success = driver.run_execute_handler(payload)
{"event": {"category": "operator", "name":"processing_started", "level": "info", "timestamp": "20211126T043931.735Z", "stage": "find dicom series"}, "message": "Dicom IO Find Dicom Series"}
  File "/usr/local/lib/python3.6/dist-packages/nvidia_clara_pipeline_driver/driver.py", line 154, in run_execute_handler
[PERF] Dicom IO Find Dicom Series Start Time: 1637901571735
    return self._execute_handler(self, payload)
{"event": {"category": "operator","name":"processing_ended", "level": "info", "timestamp": "20211126T043931.883Z", "elapsed_time": 148, "stage": "find dicom series"},"message":"Dicom IO Find Dicom Series"}
  File "./write.py", line 33, in execute
[PERF] Dicom IO Find Dicom Series End Time: 1637901571883
[PERF] Dicom IO Find Dicom Series Elapsed Time (ms): 148
    mhd_to_dicom(envs.dcm_folder, envs.input_folder, envs.output_folder)
{"event": {"category": "operator", "name":"processing_started", "level": "info", "timestamp": "20211126T043931.883Z", "stage": "parse image paths"}, "message": "Dicom IO Parse Image Paths"}
  File "/home/clara/dio/processor.py", line 122, in mhd_to_dicom
[PERF] Dicom IO Parse Image Paths Start Time: 1637901571883
    on_mhd_found
{"event": {"category": "operator","name":"processing_ended", "level": "info", "timestamp": "20211126T043931.968Z", "elapsed_time": 86, "stage": "parse image paths"},"message":"Dicom IO Parse Image Paths"}
  File "/home/clara/dio/mhd.py", line 59, in find_mhds_by_series
[PERF] Dicom IO Parse Image Paths End Time: 1637901571969
    on_mhd_callback(series_id, mhd_path)
[PERF] Dicom IO Parse Image Paths Elapsed Time (ms): 86
  File "/home/clara/dio/processor.py", line 110, in on_mhd_found
{"event": {"category": "operator", "name":"processing_started", "level": "info", "timestamp": "20211126T043931.969Z", "stage": "load mhd file"}, "message": "Dicom IO Load MHD File"}
    output_dir
[PERF] Dicom IO Load MHD File Start Time: 1637901571969
  File "/home/clara/dio/mhd.py", line 232, in mhd_to_dicom_series
{"event": {"category": "operator","name":"processing_ended", "level": "info", "timestamp": "20211126T043932.354Z", "elapsed_time": 385, "stage": "load mhd file"},"message":"Dicom IO Load MHD File"}
    metadata = create_metadata_dict(dicom_image_paths, mhd_image)
[PERF] Dicom IO Load MHD File End Time: 1637901572354
  File "/home/clara/dio/mhd.py", line 146, in create_metadata_dict
[PERF] Dicom IO Load MHD File Elapsed Time (ms): 385
    image_orientation = (direction[0], direction[3], direction[6],
{"event": {"category": "operator", "name":"processing_started", "level": "info", "timestamp": "20211126T043932.354Z", "stage": "creating dicom metadata"}, "message": "Dicom IO Creating Dicom Metadata"}
IndexError: tuple index out of range
[PERF] Dicom IO Creating Dicom Metadata Start Time: 1637901572354
[driver] Pipeline driver `execute` callback returned error code (1). (1, is_err=True)
{"event": {"category": "operator","name":"processing_ended", "level": "info", "timestamp": "20211126T043933.079Z", "elapsed_time": 1345, "stage": "mhd to dicom"},"message":"MHD to Dicom"}
[PERF] MHD to Dicom End Time: 1637901573080
[driver] Pipeline-driver execution completed with 1 error(s). (-1, is_err=True)
[PERF] MHD to Dicom Elapsed Time (ms): 1345
[driver] nvidia_clara_cpd__wait_for_completion() is deprecated.
{"event": {"category": "operator", "name":"processing_ended", "level": "info", "timestamp": "20211126T043933.227Z", "elapsed_time": 38842}, "message": "Dicom Writer"}
Clara Pipeline Driver no longer expects applications to wait for completion. (0, is_err=True)
[PERF] Dicom Writer End Time: 1637901573227
[PERF] Dicom Writer Elapsed Time (ms): 38842