Problem compiling the HDF4 library with the PGI compilers

sp11 · October 30, 2018, 9:24pm

Hello,
I’m moving from gfortran to pgfortran (and gcc → pgcc) and am trying to compile the HDF4 library ( Index of /ftp/HDF/releases/HDF4.2.14/src )

Unfortunately I get many error messages and compilation fails. I attach a lot of configure and compilation below (truncated, there are lots of errors and I have only included the first few).

Does anyone have an idea what could be going wrong here? I’ve googled and have had no luck finding an answer. This happens on the most recent Linux Mint distro.

Thanks!

checking for a BSD-compatible install… /usr/bin/install -c
checking whether build environment is sane… yes
/media/eum/MAIN/prog/Library/code/hdf-4.2.13/bin/missing: Unknown `--is-lightweight' option Try` /media/eum/MAIN/prog/Library/code/hdf-4.2.13/bin/missing --help’ for more information
configure: WARNING: ‘missing’ script is too old or missing
checking for a thread-safe mkdir -p… /bin/mkdir -p
checking for gawk… gawk
checking whether make sets $(MAKE)… yes
checking whether make supports nested variables… yes
checking whether to enable maintainer-specific portions of Makefiles… no
checking shell variables initial values… done
checking build system type… x86_64-unknown-linux-gnu
checking host system type… x86_64-unknown-linux-gnu
checking if basename works… yes
checking if xargs works… yes
checking for config x86_64-unknown-linux-gnu… no
checking for config x86_64-unknown-linux-gnu… no
checking for config unknown-linux-gnu… no
checking for config unknown-linux-gnu… no
checking for config x86_64-linux-gnu… no
checking for config x86_64-linux-gnu… no
checking for config x86_64-unknown… no
checking for config linux-gnu… found
checking whether make sets $(MAKE)… (cached) yes
checking for gcc… gcc
checking whether the C compiler works… yes
checking for C compiler default output file name… a.out
checking for suffix of executables…
checking whether we are cross compiling… no
checking for suffix of object files… o
checking whether we are using the GNU C compiler… yes
checking whether gcc accepts -g… yes
checking for gcc option to accept ISO C89… none needed
checking whether gcc understands -c and -o together… yes
checking for style of include used by make… GNU
checking dependency style of gcc… gcc3
checking how to run the C preprocessor… gcc -E
checking for g++… g++
checking whether we are using the GNU C++ compiler… yes
checking whether g++ accepts -g… yes
checking dependency style of g++… gcc3
checking whether we are using the GNU Fortran 77 compiler… no
checking whether pgfortran accepts -g… yes
checking how to get verbose linking output from pgfortran… -v
checking for Fortran 77 libraries of pgfortran… -L/opt/pgi/linux86-64/18.7/lib -L/usr/lib64 -L/usr/lib/gcc/x86_64-linux-gnu/7 -lpgf90rtl -lpgf90 -lpgf90_rpm1 -lpgf902 -lpgftnrtl -lpgmp -lnuma -lpthread -lpgmath -lnspgc -lpgc -lrt -lm -L/usr/lib/gcc/x86_64-linux-gnu/7/…/…/…/…/lib64
checking for dummy main to link with Fortran 77 libraries… none
checking for Fortran 77 name-mangling scheme… unknown
configure: WARNING: unknown Fortran name-mangling scheme
checking if Java JNI interface enabled… no
checking whether ln -s works… yes
checking for ar… ar
checking for bison… bison -y
checking for flex… flex
checking for diff… diff -w
checking for makeinfo… makeinfo
checking for neqn… neqn
checking for tbl… tbl
checking how to print strings… printf
checking for a sed that does not truncate output… /bin/sed
checking for grep that handles long lines and -e… /bin/grep
checking for egrep… /bin/grep -E
checking for fgrep… /bin/grep -F
checking for ld used by gcc… /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld… yes
checking for BSD- or MS-compatible name lister (nm)… /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface… BSD nm
checking the maximum length of command line arguments… 1572864
checking whether the shell understands some XSI constructs… yes
checking whether the shell understands “+=”… yes
checking how to convert x86_64-unknown-linux-gnu file names to x86_64-unknown-linux-gnu format… func_convert_file_noop
checking how to convert x86_64-unknown-linux-gnu file names to toolchain format… func_convert_file_noop
checking for /usr/bin/ld option to reload object files… -r
checking for objdump… objdump
checking how to recognize dependent libraries… pass_all
checking for dlltool… no
checking how to associate runtime and link libraries… printf %s\n
checking for archiver @FILE support… @
checking for strip… strip
checking for ranlib… ranlib
checking command to parse /usr/bin/nm -B output from gcc object… ok
checking for sysroot… no
checking for mt… mt
checking if mt is a manifest tool… no
checking for ANSI C header files… yes
checking for sys/types.h… yes
checking for sys/stat.h… yes
checking for stdlib.h… yes
checking for string.h… yes
checking for memory.h… yes
checking for strings.h… yes
checking for inttypes.h… yes
checking for stdint.h… yes
checking for unistd.h… yes
checking for dlfcn.h… yes
checking for objdir… .libs
checking if gcc supports -fno-rtti -fno-exceptions… no
checking for gcc option to produce PIC… -fPIC -DPIC
checking if gcc PIC flag -fPIC -DPIC works… yes
checking if gcc static flag -static works… no
checking if gcc supports -c -o file.o… yes
checking if gcc supports -c -o file.o… (cached) yes
checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries… yes
checking dynamic linker characteristics… GNU/Linux ld.so
checking how to hardcode library paths into programs… immediate
checking for shl_load… no
checking for shl_load in -ldld… no
checking for dlopen… no
checking for dlopen in -ldl… yes
checking whether a program can dlopen itself… yes
checking whether a statically linked program can dlopen itself… yes
checking whether stripping libraries is possible… yes
checking if libtool supports shared libraries… yes
checking whether to build shared libraries… no
checking whether to build static libraries… yes
checking how to run the C++ preprocessor… g++ -E
checking for ld used by g++… /usr/bin/ld -m elf_x86_64
checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld… yes
checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries… yes
checking for g++ option to produce PIC… -fPIC -DPIC
checking if g++ PIC flag -fPIC -DPIC works… yes
checking if g++ static flag -static works… no
checking if g++ supports -c -o file.o… yes
checking if g++ supports -c -o file.o… (cached) yes
checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries… yes
checking dynamic linker characteristics… (cached) GNU/Linux ld.so
checking how to hardcode library paths into programs… immediate
checking if libtool supports shared libraries… yes
checking whether to build shared libraries… no
checking whether to build static libraries… yes
checking for pgfortran option to produce PIC… -fpic
checking if pgfortran PIC flag -fpic works… yes
checking if pgfortran static flag -Bstatic works… yes
checking if pgfortran supports -c -o file.o… yes
checking if pgfortran supports -c -o file.o… (cached) yes
checking whether the pgfortran linker (/usr/bin/ld -m elf_x86_64) supports shared libraries… yes
checking dynamic linker characteristics… (cached) GNU/Linux ld.so
checking how to hardcode library paths into programs… immediate
configure: creating ./config.lt
config.lt: creating libtool
checking if we should install only statically linked executables… no
checking zlib.h usability… yes
checking zlib.h presence… yes
checking for zlib.h… yes
checking for compress2 in -lz… yes
checking for compress2… yes
checking jpeglib.h usability… yes
checking jpeglib.h presence… yes
checking for jpeglib.h… yes
checking for jpeg_start_decompress in -ljpeg… yes
checking szlib.h usability… yes
checking szlib.h presence… yes
checking for szlib.h… yes
checking for SZ_BufftoBuffCompress in -lsz… yes
checking for szlib encoder… yes
checking for xdr library support… yes
checking for ANSI C header files… (cached) yes
checking whether gcc and cc understand -c and -o together… yes
checking how to run the C++ preprocessor… g++ -E
checking whether pgfortran understands -c and -o together… yes
checking size of int*… 8
checking whether byte ordering is bigendian… no
checking for build mode… production
checking for math library support… yes
checking for fork… yes
checking for system… yes
checking for vfork… yes
checking for wait… yes
checking if deprecated public symbols are available… yes
checking that generated files are newer than configure… done
configure: creating ./config.status
config.status: creating Makefile
config.status: creating libhdf4.settings
config.status: creating hdf/Makefile
config.status: creating hdf/examples/Makefile
config.status: creating hdf/fortran/Makefile
config.status: creating hdf/fortran/examples/Makefile
config.status: creating hdf/src/Makefile
config.status: creating hdf/test/Makefile
config.status: creating hdf/util/Makefile
config.status: creating hdf/util/h4cc
config.status: creating hdf/util/h4fc
config.status: creating hdf/util/h4redeploy
config.status: creating hdf/util/testutil.sh
config.status: creating man/Makefile
config.status: creating mfhdf/fortran/ftest.f
config.status: creating mfhdf/fortran/jackets.c
config.status: creating mfhdf/fortran/netcdf.inc
config.status: creating mfhdf/libsrc/netcdf.h
config.status: creating mfhdf/Makefile
config.status: creating mfhdf/dumper/Makefile
config.status: creating mfhdf/dumper/testhdp.sh
config.status: creating mfhdf/examples/Makefile
config.status: creating mfhdf/examples/testexamples.sh
config.status: creating mfhdf/fortran/Makefile
config.status: creating mfhdf/fortran/examples/Makefile
config.status: creating mfhdf/fortran/testfortran.sh
config.status: creating mfhdf/hdfimport/Makefile
config.status: creating mfhdf/hdfimport/testutil.sh
config.status: creating mfhdf/hdiff/Makefile
config.status: creating mfhdf/hdiff/testhdiff.sh
config.status: creating mfhdf/hrepack/Makefile
config.status: creating mfhdf/hrepack/hrepack.sh
config.status: creating mfhdf/hrepack/hrepack_all.sh
config.status: creating mfhdf/libsrc/Makefile
config.status: creating mfhdf/ncdump/Makefile
config.status: creating mfhdf/ncdump/testncdump.sh
config.status: creating mfhdf/ncgen/Makefile
config.status: creating mfhdf/ncgen/testncgen.sh
config.status: creating mfhdf/nctest/Makefile
config.status: creating mfhdf/test/Makefile
config.status: creating mfhdf/test/testmfhdf.sh
config.status: creating mfhdf/xdr/Makefile
config.status: creating java/Makefile
config.status: creating java/src/Makefile
config.status: creating java/src/jni/Makefile
config.status: creating java/test/Makefile
config.status: creating java/test/junit.sh
config.status: creating java/examples/Makefile
config.status: creating hdf/src/h4config.h
config.status: executing h4config commands
modifying hdf/src/h4config.h
Post process libhdf4.settings
config.status: executing depfiles commands
config.status: executing libtool commands
config.status: executing .classes commands
Renaming “mfhdf/libsrc/netcdf.h” to “mfhdf/libsrc/hdf4_netcdf.h” .
SUMMARY OF THE HDF4 CONFIGURATION

General Information:

HDF4 Version: 4.2.13
Configured on: Tue Oct 30 21:11:54 GMT 2018
Configured by: eum@eum-gpu
Configure mode: production
Host system: x86_64-unknown-linux-gnu
Uname information: Linux eum-gpu 4.15.0-20-generic #21-Ubuntu SMP Tue Apr 24 06:16:15 UTC 2018 x86_64 x86_64 x86_64 GNU/Linux
Libraries:
Installation point: /media/eum/MAIN/prog/Library/hdf4

Compiling Options:

Compilation Mode: production
C compiler: /usr/bin/gcc
CFLAGS: -fPIC -O3 -fomit-frame-pointer
CPPFLAGS: -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP
Shared Libraries: no
Static Libraries: yes
Statically Linked Executables: no
LDFLAGS: -L/opt/pgi/linux86-64/18.7/lib -lpgf90rtl -lpgf90 -lpgf90_rpm1 -lpgf902 -lpgf90rtl -lpgftnrtl -lpgmp -lnuma -lpthread -lpgmath -lnspgc -lpgc -lrt -lm -L/media/eum/MAIN/prog/Library/zlib/lib -L/media/eum/MAIN/prog/Library/szip/lib
Extra libraries: -lsz -ljpeg -lz
Archiver: ar
Ranlib: ranlib

Languages:

Fortran: yes
Fortran Compiler: /opt/pgi/linux86-64/18.7/bin/pgfortran
FFLAGS: -fPIC

Java: no

Features:

SZIP compression: enabled with encoder
Support for netCDF API 2.3.2: no
Making all in hdf
make[1]: Entering directory ‘/media/eum/MAIN/prog/Library/code/hdf-4.2.13/hdf’
Making all in src
make[2]: Entering directory ‘/media/eum/MAIN/prog/Library/code/hdf-4.2.13/hdf/src’
make all-am
make[3]: Entering directory ‘/media/eum/MAIN/prog/Library/code/hdf-4.2.13/hdf/src’
/bin/bash …/…/libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT atom.lo -MD -MP -MF .deps/atom.Tpo -c -o atom.lo atom.c
/bin/bash …/…/libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT bitvect.lo -MD -MP -MF .deps/bitvect.Tpo -c -o bitvect.lo bitvect.c
/bin/bash …/…/libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT cdeflate.lo -MD -MP -MF .deps/cdeflate.Tpo -c -o cdeflate.lo cdeflate.c
/bin/bash …/…/libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT cnbit.lo -MD -MP -MF .deps/cnbit.Tpo -c -o cnbit.lo cnbit.c
/bin/bash …/…/libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT cnone.lo -MD -MP -MF .deps/cnone.Tpo -c -o cnone.lo cnone.c
/bin/bash …/…/libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT crle.lo -MD -MP -MF .deps/crle.Tpo -c -o crle.lo crle.c
/bin/bash …/…/libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT cskphuff.lo -MD -MP -MF .deps/cskphuff.Tpo -c -o cskphuff.lo cskphuff.c
/bin/bash …/…/libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT cszip.lo -MD -MP -MF .deps/cszip.Tpo -c -o cszip.lo cszip.c
/bin/bash …/…/libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT df24.lo -MD -MP -MF .deps/df24.Tpo -c -o df24.lo df24.c
/bin/bash …/…/libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT dfan.lo -MD -MP -MF .deps/dfan.Tpo -c -o dfan.lo dfan.c
/bin/bash …/…/libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT dfcomp.lo -MD -MP -MF .deps/dfcomp.Tpo -c -o dfcomp.lo dfcomp.c
/bin/bash …/…/libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT dfconv.lo -MD -MP -MF .deps/dfconv.Tpo -c -o dfconv.lo dfconv.c
/bin/bash …/…/libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT dfgr.lo -MD -MP -MF .deps/dfgr.Tpo -c -o dfgr.lo dfgr.c
/bin/bash …/…/libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT dfgroup.lo -MD -MP -MF .deps/dfgroup.Tpo -c -o dfgroup.lo dfgroup.c
/bin/bash …/…/libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT dfimcomp.lo -MD -MP -MF .deps/dfimcomp.Tpo -c -o dfimcomp.lo dfimcomp.c
/bin/bash …/…/libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT dfjpeg.lo -MD -MP -MF .deps/dfjpeg.Tpo -c -o dfjpeg.lo dfjpeg.c
/bin/bash …/…/libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT dfknat.lo -MD -MP -MF .deps/dfknat.Tpo -c -o dfknat.lo dfknat.c
/bin/bash …/…/libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT dfkswap.lo -MD -MP -MF .deps/dfkswap.Tpo -c -o dfkswap.lo dfkswap.c
/bin/bash …/…/libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT dfp.lo -MD -MP -MF .deps/dfp.Tpo -c -o dfp.lo dfp.c
/bin/bash …/…/libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT dfr8.lo -MD -MP -MF .deps/dfr8.Tpo -c -o dfr8.lo dfr8.c
/bin/bash …/…/libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT dfrle.lo -MD -MP -MF .deps/dfrle.Tpo -c -o dfrle.lo dfrle.c
/bin/bash …/…/libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT dfsd.lo -MD -MP -MF .deps/dfsd.Tpo -c -o dfsd.lo dfsd.c
/bin/bash …/…/libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT dfstubs.lo -MD -MP -MF .deps/dfstubs.Tpo -c -o dfstubs.lo dfstubs.c
/bin/bash …/…/libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT dfufp2i.lo -MD -MP -MF .deps/dfufp2i.Tpo -c -o dfufp2i.lo dfufp2i.c
/bin/bash …/…/libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT dfunjpeg.lo -MD -MP -MF .deps/dfunjpeg.Tpo -c -o dfunjpeg.lo dfunjpeg.c
/bin/bash …/…/libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT dfutil.lo -MD -MP -MF .deps/dfutil.Tpo -c -o dfutil.lo dfutil.c
/bin/bash …/…/libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT dynarray.lo -MD -MP -MF .deps/dynarray.Tpo -c -o dynarray.lo dynarray.c
/bin/bash …/…/libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT glist.lo -MD -MP -MF .deps/glist.Tpo -c -o glist.lo glist.c
/bin/bash …/…/libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT hbitio.lo -MD -MP -MF .deps/hbitio.Tpo -c -o hbitio.lo hbitio.c
/bin/bash …/…/libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT hblocks.lo -MD -MP -MF .deps/hblocks.Tpo -c -o hblocks.lo hblocks.c
libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT dfjpeg.lo -MD -MP -MF .deps/dfjpeg.Tpo -c dfjpeg.c -o dfjpeg.o
libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT cnone.lo -MD -MP -MF .deps/cnone.Tpo -c cnone.c -o cnone.o
libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT dynarray.lo -MD -MP -MF .deps/dynarray.Tpo -c dynarray.c -o dynarray.o
libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT dfutil.lo -MD -MP -MF .deps/dfutil.Tpo -c dfutil.c -o dfutil.o
libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT dfufp2i.lo -MD -MP -MF .deps/dfufp2i.Tpo -c dfufp2i.c -o dfufp2i.o
libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT df24.lo -MD -MP -MF .deps/df24.Tpo -c df24.c -o df24.o
libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT atom.lo -MD -MP -MF .deps/atom.Tpo -c atom.c -o atom.o
libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT cnbit.lo -MD -MP -MF .deps/cnbit.Tpo -c cnbit.c -o cnbit.o
libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT cdeflate.lo -MD -MP -MF .deps/cdeflate.Tpo -c cdeflate.c -o cdeflate.o
libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT dfknat.lo -MD -MP -MF .deps/dfknat.Tpo -c dfknat.c -o dfknat.o
libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT cszip.lo -MD -MP -MF .deps/cszip.Tpo -c cszip.c -o cszip.o
libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT dfimcomp.lo -MD -MP -MF .deps/dfimcomp.Tpo -c dfimcomp.c -o dfimcomp.o
libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT dfconv.lo -MD -MP -MF .deps/dfconv.Tpo -c dfconv.c -o dfconv.o
libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT dfan.lo -MD -MP -MF .deps/dfan.Tpo -c dfan.c -o dfan.o
libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT dfgr.lo -MD -MP -MF .deps/dfgr.Tpo -c dfgr.c -o dfgr.o
libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT dfgroup.lo -MD -MP -MF .deps/dfgroup.Tpo -c dfgroup.c -o dfgroup.o
libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT dfcomp.lo -MD -MP -MF .deps/dfcomp.Tpo -c dfcomp.c -o dfcomp.o
libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT dfkswap.lo -MD -MP -MF .deps/dfkswap.Tpo -c dfkswap.c -o dfkswap.o
libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT dfrle.lo -MD -MP -MF .deps/dfrle.Tpo -c dfrle.c -o dfrle.o
libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT bitvect.lo -MD -MP -MF .deps/bitvect.Tpo -c bitvect.c -o bitvect.o
libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT hblocks.lo -MD -MP -MF .deps/hblocks.Tpo -c hblocks.c -o hblocks.o
libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT cskphuff.lo -MD -MP -MF .deps/cskphuff.Tpo -c cskphuff.c -o cskphuff.o
libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT dfstubs.lo -MD -MP -MF .deps/dfstubs.Tpo -c dfstubs.c -o dfstubs.o
libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT dfr8.lo -MD -MP -MF .deps/dfr8.Tpo -c dfr8.c -o dfr8.o
libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT hbitio.lo -MD -MP -MF .deps/hbitio.Tpo -c hbitio.c -o hbitio.o
libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT crle.lo -MD -MP -MF .deps/crle.Tpo -c crle.c -o crle.o
libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT glist.lo -MD -MP -MF .deps/glist.Tpo -c glist.c -o glist.o
libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT dfunjpeg.lo -MD -MP -MF .deps/dfunjpeg.Tpo -c dfunjpeg.c -o dfunjpeg.o
libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT dfp.lo -MD -MP -MF .deps/dfp.Tpo -c dfp.c -o dfp.o
libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT dfsd.lo -MD -MP -MF .deps/dfsd.Tpo -c dfsd.c -o dfsd.o
cszip.c: In function ‘HCIcszip_decode’:
cszip.c:291:47: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘size_t {aka long unsigned int}’ [-Wformat=]
printf(“status: %d ??bytes != out_length %d != %d\n”,status,size_out,out_length);
~^
%ld
dfgr.c: In function ‘DFGRIaddimlut’:
dfgr.c:1460:81: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
if (( file_id = DFGRIopen(filename, newfile ? DFACC_CREATE : DFACC_RDWR))== (int32) NULL)
^
mv -f .deps/dfutil.Tpo .deps/dfutil.Plo
/bin/bash …/…/libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT hbuffer.lo -MD -MP -MF .deps/hbuffer.Tpo -c -o hbuffer.lo hbuffer.c
mv -f .deps/dfjpeg.Tpo .deps/dfjpeg.Plo
mv -f .deps/dynarray.Tpo .deps/dynarray.Plo
mv -f .deps/dfrle.Tpo .deps/dfrle.Plo
mv -f .deps/df24.Tpo .deps/df24.Plo
/bin/bash …/…/libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT hchunks.lo -MD -MP -MF .deps/hchunks.Tpo -c -o hchunks.lo hchunks.c
/bin/bash …/…/libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT hcomp.lo -MD -MP -MF .deps/hcomp.Tpo -c -o hcomp.lo hcomp.c
mv -f .deps/dfgroup.Tpo .deps/dfgroup.Plo
mv -f .deps/cnone.Tpo .deps/cnone.Plo
libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT hbuffer.lo -MD -MP -MF .deps/hbuffer.Tpo -c hbuffer.c -o hbuffer.o
mv -f .deps/dfconv.Tpo .deps/dfconv.Plo
/bin/bash …/…/libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT hcompri.lo -MD -MP -MF .deps/hcompri.Tpo -c -o hcompri.lo hcompri.c
/bin/bash …/…/libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT hdatainfo.lo -MD -MP -MF .deps/hdatainfo.Tpo -c -o hdatainfo.lo hdatainfo.c
/bin/bash …/…/libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT hdfalloc.lo -MD -MP -MF .deps/hdfalloc.Tpo -c -o hdfalloc.lo hdfalloc.c
mv -f .deps/dfunjpeg.Tpo .deps/dfunjpeg.Plo
/bin/bash …/…/libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT herr.lo -MD -MP -MF .deps/herr.Tpo -c -o herr.lo herr.c
mv -f .deps/bitvect.Tpo .deps/bitvect.Plo
mv -f .deps/dfknat.Tpo .deps/dfknat.Plo
/bin/bash …/…/libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT hextelt.lo -MD -MP -MF .deps/hextelt.Tpo -c -o hextelt.lo hextelt.c
/bin/bash …/…/libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT hfile.lo -MD -MP -MF .deps/hfile.Tpo -c -o hfile.lo hfile.c
mv -f .deps/dfcomp.Tpo .deps/dfcomp.Plo
/bin/bash …/…/libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT hfiledd.lo -MD -MP -MF .deps/hfiledd.Tpo -c -o hfiledd.lo hfiledd.c
/bin/bash …/…/libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT hkit.lo -MD -MP -MF .deps/hkit.Tpo -c -o hkit.lo hkit.c
mv -f .deps/atom.Tpo .deps/atom.Plo
/bin/bash …/…/libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT linklist.lo -MD -MP -MF .deps/linklist.Tpo -c -o linklist.lo linklist.c
libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT hchunks.lo -MD -MP -MF .deps/hchunks.Tpo -c hchunks.c -o hchunks.o
libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT hcomp.lo -MD -MP -MF .deps/hcomp.Tpo -c hcomp.c -o hcomp.o
/bin/bash …/…/libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT mcache.lo -MD -MP -MF .deps/mcache.Tpo -c -o mcache.lo mcache.c
libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT hdfalloc.lo -MD -MP -MF .deps/hdfalloc.Tpo -c hdfalloc.c -o hdfalloc.o
libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT hcompri.lo -MD -MP -MF .deps/hcompri.Tpo -c hcompri.c -o hcompri.o
libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT herr.lo -MD -MP -MF .deps/herr.Tpo -c herr.c -o herr.o
libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT hdatainfo.lo -MD -MP -MF .deps/hdatainfo.Tpo -c hdatainfo.c -o hdatainfo.o
libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT hextelt.lo -MD -MP -MF .deps/hextelt.Tpo -c hextelt.c -o hextelt.o
libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT hfile.lo -MD -MP -MF .deps/hfile.Tpo -c hfile.c -o hfile.o
libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT hkit.lo -MD -MP -MF .deps/hkit.Tpo -c hkit.c -o hkit.o
libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT hfiledd.lo -MD -MP -MF .deps/hfiledd.Tpo -c hfiledd.c -o hfiledd.o
mv -f .deps/dfp.Tpo .deps/dfp.Plo
mv -f .deps/cdeflate.Tpo .deps/cdeflate.Plo
libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT mcache.lo -MD -MP -MF .deps/mcache.Tpo -c mcache.c -o mcache.o
libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT linklist.lo -MD -MP -MF .deps/linklist.Tpo -c linklist.c -o linklist.o
/bin/bash …/…/libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT mfan.lo -MD -MP -MF .deps/mfan.Tpo -c -o mfan.lo mfan.c
/bin/bash …/…/libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT mfgr.lo -MD -MP -MF .deps/mfgr.Tpo -c -o mfgr.lo mfgr.c
mv -f .deps/dfstubs.Tpo .deps/dfstubs.Plo
mv -f .deps/cnbit.Tpo .deps/cnbit.Plo
/bin/bash …/…/libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT mstdio.lo -MD -MP -MF .deps/mstdio.Tpo -c -o mstdio.lo mstdio.c
/bin/bash …/…/libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT tbbt.lo -MD -MP -MF .deps/tbbt.Tpo -c -o tbbt.lo tbbt.c
mv -f .deps/dfkswap.Tpo .deps/dfkswap.Plo
mv -f .deps/dfan.Tpo .deps/dfan.Plo
mv -f .deps/glist.Tpo .deps/glist.Plo
/bin/bash …/…/libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT vattr.lo -MD -MP -MF .deps/vattr.Tpo -c -o vattr.lo vattr.c
/bin/bash …/…/libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT vconv.lo -MD -MP -MF .deps/vconv.Tpo -c -o vconv.lo vconv.c
/bin/bash …/…/libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT vg.lo -MD -MP -MF .deps/vg.Tpo -c -o vg.lo vg.c
libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT mfan.lo -MD -MP -MF .deps/mfan.Tpo -c mfan.c -o mfan.o
mv -f .deps/crle.Tpo .deps/crle.Plo
/bin/bash …/…/libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT vgp.lo -MD -MP -MF .deps/vgp.Tpo -c -o vgp.lo vgp.c
libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT mfgr.lo -MD -MP -MF .deps/mfgr.Tpo -c mfgr.c -o mfgr.o
mv -f .deps/hdfalloc.Tpo .deps/hdfalloc.Plo
/bin/bash …/…/libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT vhi.lo -MD -MP -MF .deps/vhi.Tpo -c -o vhi.lo vhi.c
mv -f .deps/dfufp2i.Tpo .deps/dfufp2i.Plo
libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT tbbt.lo -MD -MP -MF .deps/tbbt.Tpo -c tbbt.c -o tbbt.o
libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT vattr.lo -MD -MP -MF .deps/vattr.Tpo -c vattr.c -o vattr.o
libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT vconv.lo -MD -MP -MF .deps/vconv.Tpo -c vconv.c -o vconv.o
libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT mstdio.lo -MD -MP -MF .deps/mstdio.Tpo -c mstdio.c -o mstdio.o
/bin/bash …/…/libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT vio.lo -MD -MP -MF .deps/vio.Tpo -c -o vio.lo vio.c
libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT vg.lo -MD -MP -MF .deps/vg.Tpo -c vg.c -o vg.o
mv -f .deps/cskphuff.Tpo .deps/cskphuff.Plo
mv -f .deps/hbuffer.Tpo .deps/hbuffer.Plo
/bin/bash …/…/libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT vparse.lo -MD -MP -MF .deps/vparse.Tpo -c -o vparse.lo vparse.c
/bin/bash …/…/libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT vrw.lo -MD -MP -MF .deps/vrw.Tpo -c -o vrw.lo vrw.c
mv -f .deps/hcompri.Tpo .deps/hcompri.Plo
libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT vgp.lo -MD -MP -MF .deps/vgp.Tpo -c vgp.c -o vgp.o
libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT vhi.lo -MD -MP -MF .deps/vhi.Tpo -c vhi.c -o vhi.o
libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT vio.lo -MD -MP -MF .deps/vio.Tpo -c vio.c -o vio.o
mv -f .deps/herr.Tpo .deps/herr.Plo
/bin/bash …/…/libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT vsfld.lo -MD -MP -MF .deps/vsfld.Tpo -c -o vsfld.lo vsfld.c
mv -f .deps/hbitio.Tpo .deps/hbitio.Plo
/bin/bash …/…/libtool --tag=F77 --mode=compile pgfortran -fPIC -c -o df24ff.lo df24ff.f
/bin/bash …/…/libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT dfanf.lo -MD -MP -MF .deps/dfanf.Tpo -c -o dfanf.lo dfanf.c
libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT vrw.lo -MD -MP -MF .deps/vrw.Tpo -c vrw.c -o vrw.o
mv -f .deps/linklist.Tpo .deps/linklist.Plo
libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT vparse.lo -MD -MP -MF .deps/vparse.Tpo -c vparse.c -o vparse.o
/bin/bash …/…/libtool --tag=F77 --mode=compile pgfortran -fPIC -c -o dfanff.lo dfanff.f
mv -f .deps/cszip.Tpo .deps/cszip.Plo
libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT vsfld.lo -MD -MP -MF .deps/vsfld.Tpo -c vsfld.c -o vsfld.o
/bin/bash …/…/libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT dff.lo -MD -MP -MF .deps/dff.Tpo -c -o dff.lo dff.c
mv -f .deps/hkit.Tpo .deps/hkit.Plo
mv -f .deps/dfgr.Tpo .deps/dfgr.Plo
/bin/bash …/…/libtool --tag=F77 --mode=compile pgfortran -fPIC -c -o dfff.lo dfff.f
libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT dfanf.lo -MD -MP -MF .deps/dfanf.Tpo -c dfanf.c -o dfanf.o
/bin/bash …/…/libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT dfpf.lo -MD -MP -MF .deps/dfpf.Tpo -c -o dfpf.lo dfpf.c
mv -f .deps/mstdio.Tpo .deps/mstdio.Plo
libtool: compile: pgfortran -fPIC -c df24ff.f -o df24ff.o
mv -f .deps/dfr8.Tpo .deps/dfr8.Plo
/bin/bash …/…/libtool --tag=F77 --mode=compile pgfortran -fPIC -c -o dfpff.lo dfpff.f
libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT dff.lo -MD -MP -MF .deps/dff.Tpo -c dff.c -o dff.o
mv -f .deps/mcache.Tpo .deps/mcache.Plo
/bin/bash …/…/libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT dfr8f.lo -MD -MP -MF .deps/dfr8f.Tpo -c -o dfr8f.lo dfr8f.c
/bin/bash …/…/libtool --tag=F77 --mode=compile pgfortran -fPIC -c -o dfr8ff.lo dfr8ff.f
libtool: compile: pgfortran -fPIC -c dfanff.f -o dfanff.o
mv -f .deps/vhi.Tpo .deps/vhi.Plo
libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT dfpf.lo -MD -MP -MF .deps/dfpf.Tpo -c dfpf.c -o dfpf.o
/bin/bash …/…/libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/media/eum/MAIN/prog/Library/zlib/include -I/media/eum/MAIN/prog/Library/szip/include -DBIG_LONGS -DSWAP -fPIC -O3 -fomit-frame-pointer -MT dfsdf.lo -MD -MP -MF .deps/dfsdf.Tpo -c -o dfsdf.lo dfsdf.c
In file included from dfanf.c:45:0:
hproto_fortran.h:31:29: error: ‘H4_F77_FUNC’ declared as function returning a function

define ndaiganl H4_F77_FUNC(daiganl, DAIGANL)

^
hproto_fortran.h:50:36: note: in expansion of macro ‘ndaiganl’
HDFFCLIBAPI FRETVAL(intf) ndaiganl
^~~~~~~~
hproto_fortran.h:52:18: warning: parameter names (without types) in function declaration
intf * fnlen);
^~~~
hproto_fortran.h:32:29: error: ‘H4_F77_FUNC’ declared as function returning a function

define ndaigann H4_F77_FUNC(daigann, DAIGANN)

^
hproto_fortran.h:54:36: note: in expansion of macro ‘ndaigann’
HDFFCLIBAPI FRETVAL(intf) ndaigann
^~~~~~~~
hproto_fortran.h:56:18: warning: parameter names (without types) in function declaration
intf * maxlen, intf * type, intf * fnlen);
^~~~
hproto_fortran.h:33:29: error: ‘H4_F77_FUNC’ declared as function returning a function

define ndaipann H4_F77_FUNC(daipann, DAIPANN)

^
hproto_fortran.h:58:36: note: in expansion of macro ‘ndaipann’
HDFFCLIBAPI FRETVAL(intf) ndaipann
^~~~~~~~
hproto_fortran.h:60:18: warning: parameter names (without types) in function declaration
intf * annlen, intf * type, intf * fnlen);
^~~~
hproto_fortran.h:34:29: error: ‘H4_F77_FUNC’ declared as function returning a function

define ndailist H4_F77_FUNC(dailist, DAILIST)

…

Makefile:666: recipe for target ‘dfsdf.lo’ failed
make[3]: *** [dfsdf.lo] Error 1
mv -f .deps/mfan.Tpo .deps/mfan.Plo
mv -f .deps/vg.Tpo .deps/vg.Plo
mv -f .deps/vattr.Tpo .deps/vattr.Plo
mv -f .deps/vio.Tpo .deps/vio.Plo
mv -f .deps/hfiledd.Tpo .deps/hfiledd.Plo
mv -f .deps/hfile.Tpo .deps/hfile.Plo
mv -f .deps/vgp.Tpo .deps/vgp.Plo
mv -f .deps/hchunks.Tpo .deps/hchunks.Plo
mv -f .deps/dfsd.Tpo .deps/dfsd.Plo
mv -f .deps/mfgr.Tpo .deps/mfgr.Plo
make[3]: Leaving directory ‘/media/eum/MAIN/prog/Library/code/hdf-4.2.13/hdf/src’
Makefile:485: recipe for target ‘all’ failed
make[2]: *** [all] Error 2
make[2]: Leaving directory ‘/media/eum/MAIN/prog/Library/code/hdf-4.2.13/hdf/src’
Makefile:425: recipe for target ‘all-recursive’ failed
make[1]: *** [all-recursive] Error 1
make[1]: Leaving directory ‘/media/eum/MAIN/prog/Library/code/hdf-4.2.13/hdf’
Makefile:515: recipe for target ‘all-recursive’ failed
make: *** [all-recursive] Error 1

aglobus1 · October 31, 2018, 3:45pm

Hi sp1,

I managed to get this to compile with 18.7, using pretty much the same flags and configure options you are. I noticed you specified gcc as the CC instead of pgcc; perhaps just a typo.

 CC=pgcc F77=pgfortran FFLAGS="-fPIC" CFLAGS="" \
CPPFLAGS="" CPP=cpp LDFLAGS="-L/home/aglobus/lib \
-L/usr/pgi/linux86-64/18.7/lib -lpgf90rtl -lpgf90 -lpgf90_rpm1 \
-lpgf902 -lpgf90rtl -lpgftnrtl -lpgmp -lnuma -lpgmath -lnspgc \
-lpgc -lpthread -lrt -lm -lsz -ljpeg -lz" ../configure \
--prefix=/home/aglobus --with-szlib=/home/aglobus/include/,\
/home/aglobus/lib --enable-netcdf=no --with-jpeg=/home/aglobus/include,\
/home/aglobus/lib

Though I noticed yours seems to spit out a warning that mine is missing.

configure: WARNING: unknown Fortran name-mangling scheme

I would like to inspect the config.log more closely to see why it is failing at this step. Feel free to send the config.log file to trs@pgroup.com