Hi,
error:
/usr/bin/ld: cannot find -lmpichf90
I am new to parallel processing with MPI. I am having a problem with similar error msg as a previous post (the bottom has the log file with the error msg):
http://www.pgroup.com/userforum/viewtopic.php?t=1589&postdays=0&postorder=asc&start=0
I tried his solution but the problem persists.
I use “pgf90” and “mpif90” wrapper. Following are their locations:
$ which mpif90
/usr/bin/mpif90
$ which pgf90
/opt/pgi/linux86-64/6.1/bin/pgf90
I also see folders named “mpich.pgi” and “mpich2.pgi” located in folder “/opt”.
I did some googling and am guessing maybe the file “libmpichf90” is missing…
I then ran “/sbin/ldconfig -p” command, and got the following from the list:
libmpichf90nc.so.2 (libc6,x86-64) => /usr/lib64/libmpichf90nc.so.2
libmpichf90nc.so.2 (libc6) => /usr/lib/libmpichf90nc.so.2
libmpichf90nc.so (libc6,x86-64) => /usr/lib64/libmpichf90nc.so
libmpichf90nc.so (libc6) => /usr/lib/libmpichf90nc.so
libmpichf90.so.2 (libc6,x86-64) => /usr/lib64/libmpichf90.so.2
libmpichf90.so.2 (libc6) => /usr/lib/libmpichf90.so.2
libmpichf90.so (libc6,x86-64) => /usr/lib64/libmpichf90.so
libmpichf90.so (libc6) => /usr/lib/libmpichf90.so
libmpich.so.2 (libc6,x86-64) => /usr/lib64/libmpich.so.2
libmpich.so.2 (libc6) => /usr/lib/libmpich.so.2
libmpich.so (libc6,x86-64) => /usr/lib64/libmpich.so
libmpich.so (libc6) => /usr/lib/libmpich.so
The following is the log file with error msg:
$ ./Make.com
cd /home/xy/HYCOM/hycom/ATLb2.00/src_2.1.03_22_mpi
setenv ARCH intel
setenv MPICH_F90 /opt/pgi/linux86-64/6.1/bin/pgf90
setenv PGI /opt/pgi
setenv TYPE `echo $cwd | awk -F"_" '{print $NF}'`
echo /home/xy/HYCOM/hycom/ATLb2.00/src_2.1.03_22_mpi
awk -F_ {print $NF}
if ( ! -e ../config/intel_mpi ) then
make hycom ARCH=intel TYPE=mpi
mpif90 -DIA32 -DREAL8 -DMPI -DSERIAL_IO -DTIMER -g -fast -byteswapio -r8 -c mod_xc.F
mpif90 -DIA32 -DREAL8 -DMPI -DSERIAL_IO -DTIMER -g -fast -byteswapio -r8 -c mod_za.F
PGF90-W-0093-Type conversion of expression performed (mod_za.F: 867)
PGF90-W-0093-Type conversion of expression performed (mod_za.F: 867)
PGF90-W-0093-Type conversion of expression performed (mod_za.F: 868)
PGF90-W-0093-Type conversion of expression performed (mod_za.F: 868)
PGF90-W-0093-Type conversion of expression performed (mod_za.F: 886)
PGF90-W-0093-Type conversion of expression performed (mod_za.F: 886)
PGF90-W-0093-Type conversion of expression performed (mod_za.F: 887)
PGF90-W-0093-Type conversion of expression performed (mod_za.F: 887)
0 inform, 8 warnings, 0 severes, 0 fatal for zaiord
PGF90-W-0093-Type conversion of expression performed (mod_za.F: 1157)
PGF90-W-0093-Type conversion of expression performed (mod_za.F: 1157)
PGF90-W-0093-Type conversion of expression performed (mod_za.F: 1158)
PGF90-W-0093-Type conversion of expression performed (mod_za.F: 1158)
PGF90-W-0093-Type conversion of expression performed (mod_za.F: 1177)
PGF90-W-0093-Type conversion of expression performed (mod_za.F: 1177)
PGF90-W-0093-Type conversion of expression performed (mod_za.F: 1178)
PGF90-W-0093-Type conversion of expression performed (mod_za.F: 1178)
PGF90-W-0093-Type conversion of expression performed (mod_za.F: 1197)
PGF90-W-0093-Type conversion of expression performed (mod_za.F: 1197)
PGF90-W-0093-Type conversion of expression performed (mod_za.F: 1198)
PGF90-W-0093-Type conversion of expression performed (mod_za.F: 1198)
PGF90-W-0093-Type conversion of expression performed (mod_za.F: 1212)
PGF90-W-0093-Type conversion of expression performed (mod_za.F: 1212)
PGF90-W-0093-Type conversion of expression performed (mod_za.F: 1213)
PGF90-W-0093-Type conversion of expression performed (mod_za.F: 1213)
0 inform, 16 warnings, 0 severes, 0 fatal for zaiowr
mpif90 -DIA32 -DREAL8 -DMPI -DSERIAL_IO -DTIMER -g -fast -byteswapio -r8 -c mod_pipe.F
mpif90 -g -fast -byteswapio -r8 -c hycom.f
mpif90 -g -fast -byteswapio -r8 -c archiv.f
mpif90 -g -fast -byteswapio -r8 -c barotp.f
mpif90 -g -fast -byteswapio -r8 -c bigrid.f
mpif90 -g -fast -byteswapio -r8 -c blkdat.f
mpif90 -g -fast -byteswapio -r8 -c cnuity.f
mpif90 -g -fast -byteswapio -r8 -c convec.f
mpif90 -g -fast -byteswapio -r8 -c diapfl.f
mpif90 -g -fast -byteswapio -r8 -c dpthuv.f
mpif90 -g -fast -byteswapio -r8 -c dpudpv.f
mpif90 -g -fast -byteswapio -r8 -c forfun.f
mpif90 -g -fast -byteswapio -r8 -c geopar.f
mpif90 -g -fast -byteswapio -r8 -c hybgen.f
mpif90 -g -fast -byteswapio -r8 -c icloan.f
mpif90 -g -fast -byteswapio -r8 -c inicon.f
mpif90 -g -fast -byteswapio -r8 -c inikpp.f
mpif90 -g -fast -byteswapio -r8 -c inimy.f
mpif90 -g -fast -byteswapio -r8 -c latbdy.f
mpif90 -g -fast -byteswapio -r8 -c matinv.f
mpif90 -g -fast -byteswapio -r8 -c momtum.f
mpif90 -g -fast -byteswapio -r8 -c mxkprf.f
PGF90-W-0093-Type conversion of expression performed (mxkprf.f: 786)
PGF90-W-0093-Type conversion of expression performed (mxkprf.f: 786)
0 inform, 2 warnings, 0 severes, 0 fatal for mxkppaij
mpif90 -g -fast -byteswapio -r8 -c mxkrt.f
mpif90 -g -fast -byteswapio -r8 -c mxkrtm.f
mpif90 -g -fast -byteswapio -r8 -c mxpwp.f
mpif90 -g -fast -byteswapio -r8 -c overtn.f
mpif90 -g -fast -byteswapio -r8 -c poflat.f
mpif90 -g -fast -byteswapio -r8 -c prtmsk.f
mpif90 -g -fast -byteswapio -r8 -c psmoo.f
mpif90 -g -fast -byteswapio -r8 -c restart.f
mpif90 -g -fast -byteswapio -r8 -c stencl.f
mpif90 -g -fast -byteswapio -r8 -c thermf.f
mpif90 -g -fast -byteswapio -r8 -c trcupd.f
mpif90 -g -fast -byteswapio -r8 -c tsadvc.f
mpif90 -g -fast -byteswapio -r8 -c zebra.f
mpif90 -DIA32 -DREAL8 -DMPI -DSERIAL_IO -DTIMER -g -fast -byteswapio -r8 -c machine.F
mpif90 -DIA32 -DREAL8 -DMPI -DSERIAL_IO -DTIMER -g -fast -byteswapio -r8 -c wtime.F
gcc -DIA32 -DREAL8 -DMPI -DSERIAL_IO -DTIMER -O -c machi_c.c
mpif90 -g -fast -byteswapio -r8 -Wl,-Bstatic -o hycom mod_xc.o mod_za.o mod_pipe.o hycom.o archiv.o barotp.o bigrid.o blkdat.o cnuity.o convec.o diapfl.o dpthuv.o dpudpv.o forfun.o geopar.o hybgen.o icloan.o inicon.o inikpp.o inimy.o latbdy.o matinv.o momtum.o mxkprf.o mxkrt.o mxkrtm.o mxpwp.o overtn.o poflat.o prtmsk.o psmoo.o restart.o stencl.o thermf.o trcupd.o tsadvc.o zebra.o machine.o wtime.o machi_c.o
/usr/bin/ld: cannot find -lmpichf90
make: *** [hycom] Error 2
endif
I really appreciate if someone can help me.
Thanks a lot.
Mike Y.