Need to Invert UART2 RTS

[    6.279043] 3140000.serial: ttyS0 at MMIO 0x3140000 (irq = 113, base_baud = 4250000) is a Tegra

Okay, it seems you are using serial@3140000 currently.

Please share the result of the following command on your board.

$ sudo busybox devmem 0x03140020

It is the register of UART_IRDA_CSR_0 of UARTE.
The bit 3 is INVERT_RTS.
Please try to enable it to check if it can help for your case.