Post processing logic for TensorRT Peoplenet in Python

Hi
I am looking for the post processing logic for tensorrt peoplenet in python. I’ve tried the different code snippets provided in the forum

but I am getting the out of bound error

Traceback (most recent call last):
File “cuda_peoplenet.py”, line 254, in
bboxes, class_ids, scores = postprocess(
File “cuda_peoplenet.py”, line 218, in postprocess
o4 = boxes[y2_idx + w + h * grid_w]
IndexError: index 6122 is out of bounds for axis 0 with size 6120

Can someone please help me in figuring out what the problem is ?

Can you attach your own code? I want to see the changes you’ve made.

import os
import time

import cv2
import matplotlib.pyplot as plt
import numpy as np
import pycuda.driver as cuda
import tensorrt as trt
from PIL import Image


class HostDeviceMem(object):
    def __init__(self, host_mem, device_mem):
        self.host = host_mem
        self.device = device_mem

    def __str__(self):
        return "Host:\n" + str(self.host) + "\nDevice:\n" + str(self.device)

    def __repr__(self):
        return self.__str__()


def load_engine(trt_runtime, engine_path):
    with open(engine_path, "rb") as f:
        engine_data = f.read()
    engine = trt_runtime.deserialize_cuda_engine(engine_data)
    return engine


def allocate_buffers(engine, batch_size=1):
    """Allocates host and device buffer for TRT engine inference.
    This function is similair to the one in common.py, but
    converts network outputs (which are np.float32) appropriately
    before writing them to Python buffer. This is needed, since
    TensorRT plugins doesn't support output type description, and
    in our particular case, we use NMS plugin as network output.
    Args:
        engine (trt.ICudaEngine): TensorRT engine
    Returns:
        inputs [HostDeviceMem]: engine input memory
        outputs [HostDeviceMem]: engine output memory
        bindings [int]: buffer to device bindings
        stream (cuda.Stream): cuda stream for engine inference synchronization
    """
    inputs = []
    outputs = []
    bindings = []
    stream = cuda.Stream()

    # Current NMS implementation in TRT only supports DataType.FLOAT but
    # it may change in the future, which could brake this sample here
    # when using lower precision [e.g. NMS output would not be np.float32
    # anymore, even though this is assumed in binding_to_type]

    for i in range(engine.num_bindings):
        binding = engine.get_tensor_name(i)
        size = trt.volume(engine.get_tensor_shape(binding))
        dtype = trt.nptype(engine.get_tensor_dtype(binding))
        # Allocate host and device buffers
        host_mem = cuda.pagelocked_empty(size, dtype)
        device_mem = cuda.mem_alloc(host_mem.nbytes)
        # Append the device buffer to device bindings.
        bindings.append(int(device_mem))
        # Append to the appropriate list.
        mode = engine.get_tensor_mode(binding)
        if str(mode) == 'TensorIOMode.INPUT':
            inputs.append(HostDeviceMem(host_mem, device_mem))
        else:
            outputs.append(HostDeviceMem(host_mem, device_mem))

    return inputs, outputs, bindings, stream


# This function is generalized for multiple inputs/outputs.
# inputs and outputs are expected to be lists of HostDeviceMem objects.
def do_inference(context, bindings, inputs, outputs, stream, batch_size=1):
    # Transfer input data to the GPU.
    [cuda.memcpy_htod_async(inp.device, inp.host, stream) for inp in inputs]
    # Run inference.
    context.execute_async(
        batch_size=batch_size, bindings=bindings, stream_handle=stream.handle
    )
    # Transfer predictions back from the GPU.
    [cuda.memcpy_dtoh_async(out.host, out.device, stream) for out in outputs]
    # Synchronize the stream
    stream.synchronize()
    # Return only the host outputs.
    return [out.host for out in outputs]


def process_image(arr, w, h):
    image = Image.fromarray(np.uint8(arr))

    image_resized = image.resize(size=(w, h), resample=Image.BILINEAR)
    img_np = np.array(image_resized)
    # HWC -> CHW
    img_np = img_np.transpose((2, 0, 1))
    # Normalize to [0.0, 1.0] interval (expected by model)
    img_np = (1.0 / 255.0) * img_np
    print("Process image: ", img_np.shape)
    img_np = img_np.ravel()
    return img_np


def predict(image, model_w, model_h):
    """Infers model on batch of same sized images resized to fit the model.
    Args:
        image_paths (str): paths to images, that will be packed into batch
            and fed into model
    """
    img = process_image(image, model_w, model_h)
    print("Predict  image shape:",img.shape)
    # Copy it into appropriate place into memory
    # (self.inputs was returned earlier by allocate_buffers())
    np.copyto(inputs[0].host, img.ravel())

    # When infering on single image, we measure inference
    # time to output it to the user
    inference_start_time = time.time()

    # Fetch output from the model
    [detection_out, keepCount_out] = do_inference(
        context, bindings=bindings, inputs=inputs, outputs=outputs, stream=stream
    )

    # Output inference time
    print(
        "TensorRT inference time: {} ms".format(
            int(round((time.time() - inference_start_time) * 1000))
        )
    )

    # And return results
    return detection_out, keepCount_out


# -------------- MODEL PARAMETERS FOR DETECTNET_V2 --------------------------------
model_h = 544
model_w = 960
stride = 16
box_norm = 35.0

grid_h = int(model_h / stride)
grid_w = int(model_w / stride)
grid_size = grid_h * grid_w

grid_centers_w = []
grid_centers_h = []

for i in range(grid_h):
    value = (i * stride + 0.5) / box_norm
    grid_centers_h.append(value)

for i in range(grid_w):
    value = (i * stride + 0.5) / box_norm
    grid_centers_w.append(value)


def applyBoxNorm(o1, o2, o3, o4, x, y):
    """
    Applies the GridNet box normalization
    Args:
        o1 (float): first argument of the result
        o2 (float): second argument of the result
        o3 (float): third argument of the result
        o4 (float): fourth argument of the result
        x: row index on the grid
        y: column index on the grid

    Returns:
        float: rescaled first argument
        float: rescaled second argument
        float: rescaled third argument
        float: rescaled fourth argument
    """
    o1 = (o1 - grid_centers_w[x]) * -box_norm
    o2 = (o2 - grid_centers_h[y]) * -box_norm
    o3 = (o3 + grid_centers_w[x]) * box_norm
    o4 = (o4 + grid_centers_h[y]) * box_norm
    return o1, o2, o3, o4


def postprocess(outputs, min_confidence, analysis_classes, wh_format=True):
    """
    Postprocesses the inference output
    Args:
        outputs (list of float): inference output
        min_confidence (float): min confidence to accept detection
        analysis_classes (list of int): indices of the classes to consider

    Returns: list of list tuple: each element is a two list tuple (x, y) representing the corners of a bb
    """

    bbs = []
    class_ids = []
    scores = []
    for c in analysis_classes:
        x1_idx = c * 4 * grid_size
        y1_idx = x1_idx + grid_size
        x2_idx = y1_idx + grid_size
        y2_idx = x2_idx + grid_size

        boxes = outputs[0]
        for h in range(grid_h):
            for w in range(grid_w):
                i = w + h * grid_w
                score = outputs[1][c * grid_size + i]
                if score >= min_confidence:
                    o1 = boxes[x1_idx + w + h * grid_w]
                    o2 = boxes[y1_idx + w + h * grid_w]
                    o3 = boxes[x2_idx + w + h * grid_w]
                    o4 = boxes[y2_idx + w + h * grid_w]

                    o1, o2, o3, o4 = applyBoxNorm(o1, o2, o3, o4, w, h)

                    xmin = int(o1)
                    ymin = int(o2)
                    xmax = int(o3)
                    ymax = int(o4)
                    if wh_format:
                        bbs.append([xmin, ymin, xmax - xmin, ymax - ymin])
                    else:
                        bbs.append([xmin, ymin, xmax, ymax])
                    class_ids.append(c)
                    scores.append(float(score))

    return bbs, class_ids, scores


# TensorRT logger singleton
TRT_LOGGER = trt.Logger(trt.Logger.WARNING)
trt_engine_path = os.path.join("./resnet_engine.trt")

trt_runtime = trt.Runtime(TRT_LOGGER)
trt_engine = load_engine(trt_runtime, trt_engine_path)

# This allocates memory for network inputs/outputs on both CPU and GPU
inputs, outputs, bindings, stream = allocate_buffers(trt_engine)

# # Execution context is needed for inference
context = trt_engine.create_execution_context()

image = cv2.imread("sample_1.jpg")
image_cpy = cv2.resize(image.copy(), (model_w, model_h))

detection_out, keepCount_out = predict(image, model_w, model_h)
NUM_CLASSES = 2
threshold = 0.1


bboxes, class_ids, scores = postprocess(
    [detection_out, keepCount_out], threshold, list(range(NUM_CLASSES))
)


image_cpy = image.copy()
image_cpy = cv2.resize(image_cpy, (model_w, model_h))

# Final bboxes only take afet NMS
indexes = cv2.dnn.NMSBoxes(bboxes, scores, threshold, 0.5)
for idx in indexes:
    idx = int(idx)
    xmin, ymin, w, h = bboxes[idx]
    class_id = class_ids[idx]
    color = [255, 0, 0] if class_id else [0, 0, 255]
    cv2.rectangle(image_cpy, (xmin, ymin), (xmin + w, ymin + h), color, 2)
plt.imshow(image_cpy)
plt.show()

This the entire script. The only change that I’ve made is to add the path to the image and the trt engine

Hi,
I will go through this script once but can you try this?

Instead of
image = cv2.imread("sample_1.jpg")

Can you try this
image = cv2.imread("sample_1.jpg")[..., ::-1]

Yeah I tried that too. Got the same result. The error I posted above.

I see.
Any reason why did you not write this snippet in your code (allocate_buffers)

binding_to_type = {
        "input_1": np.float32,
        "output_bbox/BiasAdd": np.float32,
        "output_cov/Sigmoid": np.float32,
    }

have you changed the tensor names of your input and output layers?

I get those value through this iteration, so that I would avoid any type mistakes

Hi,
Request you to share the ONNX model and the script if not shared already so that we can assist you better.
Alongside you can try few things:

  1. validating your model with the below snippet

check_model.py

import sys
import onnx
filename = yourONNXmodel
model = onnx.load(filename)
onnx.checker.check_model(model).
2) Try running your model with trtexec command.

In case you are still facing issue, request you to share the trtexec “”–verbose"" log for further debugging
Thanks!

resnet34_peoplenet_int8.onnx
This is the model that I’ve used and am able to create the engine for tensorrt using trtexec

What I need is the post processing code for the output generated from tensorrt for the peoplenet model. I above code which was provided in the forum mentioned did not work. Can you please help with the post processing logic specifically for Peoplenet ?

any update on this? I am getting the same error:

o4 = boxes[y2_idx + w + h * grid_w]
IndexError: index 6120 is out of bounds for axis 0 with size 6120

So here is the solution:

The ‘boxes’ and ‘scores’ outputs were being mixed up.

try this:

boxes = outputs[1]

and

score = outputs[0][c * grid_size + i]