While testing openfold for antibody light and heavy chain structure generation, we are facing an issue on Multiple sequence alignment (MSA) as input. It seems, all MSA inputs requires same length. In general, alphafold does not such MSA requirement. Our MSA input throws an error without producing an output.
Related topics
| Topic | Replies | Views | Activity | |
|---|---|---|---|---|
| Alpha Fold Multimer API 504 gateway timeouts | 0 | 28 | October 15, 2025 | |
| Alphafold multimer issue | 0 | 12 | December 3, 2025 | |
| Alphafold2 bug | 4 | 201 | February 12, 2025 | |
| Alphafold2 API error: Internal Server Error, Inference error | 1 | 122 | January 3, 2025 | |
| Boost Alphafold2 Protein Structure Prediction with GPU-Accelerated MMseqs2 | 1 | 91 | November 13, 2024 | |
| Optimizing OpenFold Training for Drug Discovery | 1 | 271 | February 28, 2024 | |
| Alphafold2 | 8 | 182 | January 27, 2025 | |
| Unable to access even if I have credit and valid API | 1 | 202 | September 25, 2024 | |
| How to Predict Biomolecular Structures Using the OpenFold3 NIM | 1 | 33 | November 4, 2025 | |
| Alphafold2 NIM failing to read existing mgnify dataset | 0 | 56 | March 27, 2025 |