Healthcare   Parabricks


Topic Replies Views Activity
Where can I find Free Compute resources?

For fighting COVID-19, what are some free compute resources that can be used with Parabricks?

5 645 January 14, 2021
How to deploy Parabricks using AWS AMI?

Planning to deploy Parabricks on AWS, is there an AMI for ease of deployment?

4 730 May 21, 2020
Can I use quantMode?
1 46 January 18, 2022
Run parabricks and found cudaMemGetInfo returned 802
7 149 January 13, 2022
Can't run parabricks "cudaMemGetInfo returned 802 -> system not yet initialized
0 98 January 6, 2022
Replacing the trial with the official license
2 117 January 6, 2022
Can I use GenomicsDBImport later?
1 225 December 13, 2021
Can pbrun germline take stdin?
5 443 December 7, 2021
Human_PAR pipeline error
3 411 November 18, 2021
Cnvkit not accelerated at all
0 380 November 12, 2021
Not enough available memory for these GPUs
gpu
4 740 November 5, 2021
HAPLOTYPECALLER v3.5 annotation-group option
1 417 October 26, 2021
How parabricks works with petagene?
0 370 October 25, 2021
How Parabricks hide docker container content
3 316 October 18, 2021
Genome Analysis Toolkit on CUDA Boosting
0 365 May 31, 2021
Can RTX 3090 use Parabricks Pipelines Trial version?
5 324 October 12, 2021
PermissionError: [Errno 13] Permission denied: 'pblicense.bin'
1 281 September 17, 2021
How to add PASS to FILTER after generating vcf with Somatic Pipeline?
2 284 October 12, 2021
Fq2bam sorting by queryname
2 234 October 12, 2021
How does Parabricks Pipelines perform data cleaning?
2 240 October 12, 2021
An HTTP error was returned from the server
0 258 September 6, 2021
How could I compare variant calling results?
5 368 October 12, 2021
Error in 'germline' pipeline: argument --ref: invalid IsFileReadable
2 338 August 20, 2021
Cudamapper bam output?
0 234 July 14, 2021
How to generate junctions file for star_fusion
4 268 July 12, 2021
Failed to run pbrun deepvariant
2 308 July 9, 2021
'Namespace' object has no attribute 'gpu_devices'
1 537 July 9, 2021
Does the germline pipeline call through the ApplyBQSR process?
3 264 July 9, 2021
Long read analysis tools
3 201 June 23, 2021
Example run has expired
samples
2 239 October 12, 2021