Parabricks

Topic	Replies	Views	Activity
Welcome to the NVIDIA Parabricks Developer Forum Welcome to our Developer Forum! This Developer Forum is open to the entire Parabricks community and is a great place to ask questions, exchange knowledge, and connect with fellow Parabricks users. If you have purchased…	6	2129	July 17, 2024
Latest Parabricks Releases New features, performance improvements and bug fixes by release.	5	427	October 21, 2025
Memory leak crashing run at MarkDuplicates/BQSR stage in Fq2Bam ai , fq2bam	16	157	April 20, 2026
Can Parabricks generate CSI index when running fq2bam? fq2bam	1	8	April 20, 2026
Deepvariant_germline --keep-duplicates fq2bam	2	24	April 13, 2026
CRAM 3.1 Support deepvariant	1	21	March 31, 2026
Question about CPU thread scaling and control in Parabricks	3	31	April 14, 2026
Outputting both VCF and gVCF deepvariant	4	54	March 31, 2026
How to run STAR-WASP mode in pbrun rna_fq2bam?	2	33	March 25, 2026
Sorting clarification for markdup	5	121	March 18, 2026
GenotypeGVCF in Parabricks 4.3.2 not using GPUs and ending with error	4	33	March 17, 2026
Fq2bam stalls in single-end recovery mode fq2bam	3	51	March 9, 2026
Why was it that I was able to successfully run fq2bam but it didn't work properly? fq2bam	0	18	March 9, 2026
Standalone BQSR crashing but full FQ2BAM succeeding fq2bam	0	21	March 5, 2026
Options for fq2bam/markdup to only handle optical duplicates and support multi-lane samples fq2bam	1	28	February 20, 2026
Deepsomatic Invalid tumor sample name input cuda , gpu	1	31	February 17, 2026
Minimap signal error ai	0	25	February 13, 2026
Setting PAR position in DeepVariant deepvariant	0	31	February 8, 2026
Testing with WGS	0	29	January 31, 2026
Minimap2 presets	0	32	January 22, 2026
Memory issues while running Marking Duplicates and BQSR fq2bam	3	147	January 16, 2026
Genotype-only mode with HaplotypeCaller nvidia-technologies	0	34	January 9, 2026
Deepvariant fails with cram file, OK with bam deepvariant	8	140	January 19, 2026
Do researchers or students need a license to use Clara Parabricks? ai	0	51	December 29, 2025
NVIDIA Parabricks fq2bam performance fq2bam	1	78	December 17, 2025
Are you considering adding H-C data comparison to the framework?	3	54	December 2, 2025
IMX334 CSI Camera interface with Jetson orin NX camera , kernel	1	63	November 10, 2025
DeepVariant is deepsomatic? deepvariant	1	108	November 3, 2025
Since our chromosomes are too large, could you please add support for the CSI index in the next update? deepvariant	3	104	October 29, 2025
Outdated vg deepvariant	1	70	October 28, 2025

Welcome to the NVIDIA Parabricks Developer Forum

Welcome to our Developer Forum! This Developer Forum is open to the entire Parabricks community and is a great place to ask questions, exchange knowledge, and connect with fellow Parabricks users. If you have purchased…

6

2129

July 17, 2024

Latest Parabricks Releases

New features, performance improvements and bug fixes by release.

5

427

October 21, 2025

Memory leak crashing run at MarkDuplicates/BQSR stage in Fq2Bam

ai , fq2bam

16

157

April 20, 2026

Can Parabricks generate CSI index when running fq2bam?

fq2bam

1

8

April 20, 2026

Deepvariant_germline --keep-duplicates

fq2bam

2

24

April 13, 2026

CRAM 3.1 Support

deepvariant

1

21

March 31, 2026

Question about CPU thread scaling and control in Parabricks

3

31

April 14, 2026

Outputting both VCF and gVCF

deepvariant

4

54

March 31, 2026

How to run STAR-WASP mode in pbrun rna_fq2bam?

2

33

March 25, 2026

Sorting clarification for markdup

5

121

March 18, 2026

GenotypeGVCF in Parabricks 4.3.2 not using GPUs and ending with error

4

33

March 17, 2026

Fq2bam stalls in single-end recovery mode

fq2bam

3

51

March 9, 2026

Why was it that I was able to successfully run fq2bam but it didn't work properly?

fq2bam

0

18

March 9, 2026

Standalone BQSR crashing but full FQ2BAM succeeding

fq2bam

0

21

March 5, 2026

Options for fq2bam/markdup to only handle optical duplicates and support multi-lane samples

fq2bam

1

28

February 20, 2026

Deepsomatic Invalid tumor sample name input

cuda , gpu

1

31

February 17, 2026

Minimap signal error

ai

0

25

February 13, 2026

Setting PAR position in DeepVariant

deepvariant

0

31

February 8, 2026

Testing with WGS

0

29

January 31, 2026

Minimap2 presets

0

32

January 22, 2026

Memory issues while running Marking Duplicates and BQSR

fq2bam

3

147

January 16, 2026

Genotype-only mode with HaplotypeCaller

nvidia-technologies

0

34

January 9, 2026

Deepvariant fails with cram file, OK with bam

deepvariant

8

140

January 19, 2026

Do researchers or students need a license to use Clara Parabricks?

ai

0

51

December 29, 2025

NVIDIA Parabricks fq2bam performance

fq2bam

1

78

December 17, 2025

Are you considering adding H-C data comparison to the framework?

3

54

December 2, 2025

IMX334 CSI Camera interface with Jetson orin NX

camera , kernel

1

63

November 10, 2025

DeepVariant is deepsomatic?

deepvariant

1

108

November 3, 2025

Since our chromosomes are too large, could you please add support for the CSI index in the next update?

deepvariant

3

104

October 29, 2025

Outdated vg

deepvariant

1

70

October 28, 2025

Healthcare & Life Sciences Parabricks