Healthcare   Parabricks


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Where can I find Free Compute resources?

For fighting COVID-19, what are some free compute resources that can be used with Parabricks?

5 826 January 14, 2021
How to deploy Parabricks using AWS AMI?

Planning to deploy Parabricks on AWS, is there an AMI for ease of deployment?

4 945 May 21, 2020
Unauthorized: authentication required
7 240 May 17, 2022
[Parabricks3.7][A100] cudaSafeCall() failed at ParaBricks/src/mem_chain_kernel.cu/136: invalid device symbol
3 139 May 20, 2022
Where to find the version of tools used in the pipelines for the VCF files?
0 193 April 29, 2022
[troubleshooting] Download Example FASTQ Files
2 314 April 22, 2022
Planning to set up the Parabricks environment
9 419 May 5, 2022
[troubleshooting] somatic pipeline
0 260 April 20, 2022
Merging BAM files from different fq2bam runs
2 353 April 16, 2022
Parabricks Clara on A16 GPU
cuda
0 415 March 30, 2022
Input for starfusion
0 389 March 30, 2022
Could not run fq2bam as part of germline pipeline
9 664 April 8, 2022
Minor error found on sample script
2 477 April 7, 2022
Error accessing S3 bucket with Parabricks
aws
2 485 March 16, 2022
VQSR (applyVQSR) not doing any filtering
4 524 March 10, 2022
Run parabricks docker container with workflow language (snakemake/nextflow)
0 532 February 16, 2022
Parabricks on 3 GPUs?
2 638 February 15, 2022
Parabrick rna_fq2bam are running for several hours
0 574 February 3, 2022
Received signal: 11 while running fq2bam on the sample dataset
1 551 January 24, 2022
Can I use quantMode?
1 550 January 18, 2022
Run parabricks and found cudaMemGetInfo returned 802
7 795 January 13, 2022
Can't run parabricks "cudaMemGetInfo returned 802 -> system not yet initialized
0 477 January 6, 2022
Replacing the trial with the official license
3 569 January 6, 2022
Can I use GenomicsDBImport later?
1 569 December 13, 2021
Can pbrun germline take stdin?
5 769 December 7, 2021
Human_PAR pipeline error
3 596 November 18, 2021
Cnvkit not accelerated at all
0 547 November 12, 2021
Not enough available memory for these GPUs
gpu
5 964 November 5, 2021
HAPLOTYPECALLER v3.5 annotation-group option
1 573 October 26, 2021
How parabricks works with petagene?
0 557 October 25, 2021