Install scikit-image

Autonomous Machines Jetson & Embedded Systems Jetson TX2
12

Hi,

Sorry that it takes some time to figure out the dependencies.
Here are the detail building steps for scikit-image.

1. Dependencies

$ sudo apt-get install liblapack-dev gfortran

$ sudo apt-get install python3-pip
$ sudo pip3 install -U pip
$ sudo pip3 install Cython numpy

2. Scipy

$ wget https://github.com/scipy/scipy/releases/download/v1.3.3/scipy-1.3.3.tar.gz
$ tar -xzvf scipy-1.3.3.tar.gz scipy-1.3.3
$ cd scipy-1.3.3/
$ python3 setup.py install --user

3. Tiff

$ wget https://download.osgeo.org/libtiff/tiff-4.1.0.tar.gz
$ tar -xzvf tiff-4.1.0.tar.gz
$ cd tiff-4.1.0/
$ ./configure
$ make
$ sudo make install

4. Scikit-image

$ sudo apt-get install python3-sklearn
$ sudo apt-get install libaec-dev libblosc-dev libffi-dev libbrotli-dev libboost-all-dev libbz2-dev
$ sudo apt-get install libgif-dev libopenjp2-7-dev liblcms2-dev libjpeg-dev libjxr-dev liblz4-dev liblzma-dev libpng-dev libsnappy-dev libwebp-dev libzopfli-dev libzstd-dev

$ sudo pip3 install imagecodecs
$ sudo pip3 install scikit-image

5. Test

nvidia@nvidia-desktop:~$ python3
Python 3.6.9 (default, Apr 18 2020, 01:56:04) 
[GCC 8.4.0] on linux
Type "help", "copyright", "credits" or "license" for more information.
>>> import skimage
>>> skimage.__version__
'0.17.2'

Thanks.

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