Hi! I have this issue when I use parabricks 4.4.0 . How to slove it ? Thank you
docker run --rm --gpus 0 --volume /data3/fast/caicc/pan_bro/hifi/INPUT_DIR:/1 --volume /data3/fanwy/:/2 --workdir /1 nvcr.io/nvidia/clara/clara-parabricks:4.4.0-1 pbrun minimap2 --ref /1/NHYX.hap1.T2T.fa --in-fq /1/NHYX.hifi.ccs.fq.gz --out-bam /2/1.bam
[Parabricks Options Mesg]: Automatically generating ID prefix
[Parabricks Options Mesg]: Read group created for /1/NHYX.hifi.ccs.fq.gz
[Parabricks Options Mesg]:
@RG\tID:m84075_240924_174306_s1/256969\tLB:lib1\tPL:bar\tSM:sample\tPU:m84075_240924_174306_s1/256969
[PB Info 2024-Nov-21 10:32:49] ------------------------------------------------------------------------------
[PB Info 2024-Nov-21 10:32:49] || Parabricks accelerated Genomics Pipeline ||
[PB Info 2024-Nov-21 10:32:49] || Version 4.4.0-1 ||
[PB Info 2024-Nov-21 10:32:49] || minimap2 ||
[PB Info 2024-Nov-21 10:32:49] ------------------------------------------------------------------------------
terminate called after throwing an instance of ‘std::system_error’
what(): Operation not permitted
[PB Error 2024-Nov-21 10:32:49][-unknown-:0] Received signal: 6
For technical support visit NVIDIA Clara - NVIDIA Docs, exiting.
For technical support visit NVIDIA Clara - NVIDIA Docs
Exiting…
Please visit NVIDIA Clara - NVIDIA Docs for detailed documentation
Could not run minimap2
Exiting pbrun …
