Hi r.vries,
Is your custom board desgin similar to the devkit?
If yes, you could try using Jetson GPIO, or add your own gpio configuration in the following.
jetson-gpio/gpio_pin_data.py at master · NVIDIA/jetson-gpio · GitHub
Or you could just use kernel level command with export
to control GPIO.
#cat /sys/kernel/debug/gpio
Or you may refer to the following topic to access GPIO:
Jetson Nano Fast GPIO C++ Example with Direct Memory Access (DMA) - Jetson & Embedded Systems / Jetson Nano - NVIDIA Developer Forums